Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887604.1_cds_XP_016442027.1_37332
CDS Infomation

[gene=LOC107767509] [db_xref=GeneID:107767509] [protein=FRIGIDA-like protein 3] [protein_id=XP_016442027.1] [location=complement(join(375617..376036,376280..376452,377628..378672))] [gbkey=CDS]
Sequence

ATGGAAGATACACAATCAGTTACGACACTGATGGACTCCACAACCTCGAAGATACAGCAG
CTACAGAAAGCATTTGCTGAGTTGGAAAGTCATCGTGCTGTTACGCTAAACCTGAAATGG
AAGCAACTTGAAGAGCATTTTCATGGGCTTGAGAAGTCCTTGAAGAGGCGTTTCACTGAA
CTGGAAGATCAAGAGAAGGAGTTTGAAACAAAAATAGTTCAATCTAGAAAGATGTTGGAG
AAGCGTCAAGCAGCTGTTATCTCTAAGGAGCAAGCTTCACTTGAGAGCCTCCAAGAGAAA
AGAGATGCAGCAGTTTCTGCCATTACTATTGCTCTGGAGAAGCATAGGAAGCCGTATTCT
GTGGAACCTTCTTGTGAGGTGCAAGGTGGGCCGTCTATGTTTGAAGCAAAGCCCCTTGAT
TTCATACCACTTGAGAATAATAATACAGAGGATCATATCAAGCCTTTTAAGAATGATGTT
GGGGAAGTCAAGTTTTATCCAGAGTTAGTGAAGTTATGCCAAGATATGGACTCAGGAGGC
CTTCACAAATTTATATCAGACAATCGCAAGAACCTGGCTGCAGTAAGGGAGGAAATTCCA
CCTGCTTTAAGAGCTGCTGTTGATCCTGCCTTTTTGGTTCTGGACTCACTCAAGGGTTTC
TACCCGTCTGAAGTGTCAATTTCAGATGCTAAAAAAGATGCAAATCTCTTAGGTCTTCGC
CGAACTTGTATTATGCTGATGGAATCCCTTAGCATTTTATTAAAGACCCTGGAAGTAGAT
TCTATTTCAAGTTTAATATCAGGAAGCGTAAAGGAACGTGCAAAAGCGATTGCTAATGAA
TGGAAACCAAAGTTAGATGAGCTTGATGCTGATGCCAGTAATGGGAATTCCTTGGAGGCT
CATGCATTCTTACAGCTTTTAGCTACCTTTGACATTAACTCCAACTTTAACCAGGAGGAC
CTGTACAAGCTGATACCCATGGTTTCTCGTCGTCGCCAAACAGCTGATCTCTGTCGTTCC
CTTGGACTTTCTGAGAGAATGCCAGGTGTTATTGACGTGTTAGTTAATAATGGAAGGCAT
ATAGATGCTGTTAATCTAGCATTTGCTTTCGAGCTAACCGACCAGTTTTCACCTGTTTCA
CTGCTAAAATCCTACTTGAATGAAGCAAGCAAAGCATCTTCACCTGTCAAATCTGGAAAC
GCATCACCTACTCCACAGAATGATGTCAATGAGAAACAGCTGACTGCACTGAAGGCTGTG
ATTAAATGCATTGAAGAACATAAGCTTGAGGCGCAGTACCCCGTGGATCCTCTCCAAAAA
AGGGTTCTCCAGCTGGAGAAAGAAAAAGCTGACAAGAAAAGGGCAACTGAAGTTGCCAAA
CCTCAACCCAAGAGACCTCGCGCCAATTGCGTAGGAAATGGAGCAGCTCGAGTTACTAAC
GTTGCCACTGACAAGAACTTCTATGCTAGTAGAATGACTGATAGGTATCCTCAGTACATG
TATGACCGACCATATGCTTATCCCGTACCAACCGACACCCACGTCCCCTCATTCCTTGGT
ACTCCCTACAGCCTTCCTCCTGGGCATGGCAACTTCTTGGGAAATGGCTACCACTACCAG
GCTACTTACCTGCACTAA

Peptide Sequence

PEP ID

XP_016442027.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MEDTQSVTTLMDSTTSKIQQLQKAFAELESHRAVTLNLKWKQLEEHFHGLEKSLKRRFTE
LEDQEKEFETKIVQSRKMLEKRQAAVISKEQASLESLQEKRDAAVSAITIALEKHRKPYS
VEPSCEVQGGPSMFEAKPLDFIPLENNNTEDHIKPFKNDVGEVKFYPELVKLCQDMDSGG
LHKFISDNRKNLAAVREEIPPALRAAVDPAFLVLDSLKGFYPSEVSISDAKKDANLLGLR
RTCIMLMESLSILLKTLEVDSISSLISGSVKERAKAIANEWKPKLDELDADASNGNSLEA
HAFLQLLATFDINSNFNQEDLYKLIPMVSRRRQTADLCRSLGLSERMPGVIDVLVNNGRH
IDAVNLAFAFELTDQFSPVSLLKSYLNEASKASSPVKSGNASPTPQNDVNEKQLTALKAV
IKCIEEHKLEAQYPVDPLQKRVLQLEKEKADKKRATEVAKPQPKRPRANCVGNGAARVTN
VATDKNFYASRMTDRYPQYMYDRPYAYPVPTDTHVPSFLGTPYSLPPGHGNFLGNGYHYQ
ATYLH

Transcript Sequence

Gene sequence data has not been registered.